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pet28 dnmt3a3l sc27 ar tic le  (Addgene inc)


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    Structured Review

    Addgene inc pet28 dnmt3a3l sc27 ar tic le
    Pet28 Dnmt3a3l Sc27 Ar Tic Le, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pet28+dnmt3a3l+sc27/pET28-Dnmt3a3L-sc27+(Plasmid+%2371827)/pm41620608-257-20-29
    Average 93 stars, based on 11 article reviews
    pet28 dnmt3a3l sc27 ar tic le - by Bioz Stars, 2026-10
    93/100 stars

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    Related Articles

    Amplification:

    Article Title: Systematic Epigenome Editing Captures the Context-dependent Instructive Function of Chromatin Modifications
    Article Snippet: For all chromatin-modifying ‘effector’ plasmids, the scFV domain and a superfolder (sf)GFP coding sequence were amplified from the PlatTET-gRNA2 plasmid (Addgene #82559) and fused in frame with the catalytic domain (CD) or the full-length (FL) of mouse Prdm9, P300, Dot1L, G9a, Kmt5c, Setd2, Ezh2 and Ring1b , all amplified from early passage ESC cDNA. .. Dnmt3a CD and the C-terminal part of mouse Dnmt3L (3a3L) were amplified from pET28-Dnmt3a3L-sc27 (Addgene #71827). ..

    Article Title: Systematic epigenome editing captures the context-dependent instructive function of chromatin modifications
    Article Snippet: For all chromatin-modifying ‘effector’ plasmids, the sequence for the scFV domain and an sfGFP coding sequence were amplified from the PlatTET-gRNA2 plasmid (Addgene, 82559) and fused in frame with the CD or FL mouse Prdm9 , p300 , Dot1l , G9a , Kmt5c , Setd2 , Ezh2 and Ring1b , all amplified from early-passage ESC cDNA. .. Sequences for the Dnmt3a CD and the C-terminal part of mouse Dnmt3a (3a3l) were amplified from pET28-Dnmt3a3l-sc27 (Addgene, 71827). ..

    Article Title: Systematic epigenome editing captures the context-dependent instructive function of chromatin modifications.
    Article Snippet: Sequences for the Dnmt3a CD and the C-terminal part of mouse Dnmt3a (3a3l) were amplified from pET28-Dnmt3a3l-sc27 (Addgene, 71827). .. Sequences for the Dnmt3a CD and the C-terminal part of mouse Dnmt3a (3a3l) were amplified from pET28-Dnmt3a3l-sc27 (Addgene, 71827). ..

    Article Title: Designer Receptors for Nucleotide‐Resolution Analysis of Genomic 5‐Methylcytosine by Cellular Imaging
    Article Snippet: PCR fragment and vector pAnI5211 were digested with NdeI and BsrGI enzymes and then ligated with T4 ligase (New England Biolabs, M0202T) using 3:1 insert:vector molar ratio. pJaW876 was cloned by Gibson assembly2. .. For this, vector pcDNA3.1-GoldenGate-VP64 (Addgene, #47389) was linearized by PCR using primers o2079 and o2080 and the insert DNMT3a3L CD was amplified by PCR using pET28-Dnmt3a3L-sc27 (Addgene, #71827) and o2071 and o2072 primers. .. Vector pÁlM1285 was created by amplifying CMV-EBFP2 from plasmid EBFP2-N1 (Addgene #54595) using primers o2733 and o2734.

    Article Title: Enhanced targeted DNA methylation of the CMV and endogenous promoters with dCas9-DNMT3A3L entails distinct subsequent histone modification changes in CHO cells.
    Article Snippet: For generation of plasmids with scFv-linked EDs encoding the catalytic domain (CD) of DNMT3A, DNMT3A3L, KRAB and LSD1, the TET1 plasmid was digested for 1 h at 37 ◦C with FD-NotI and with FD-NheI (both Thermo Fisher Scientific). .. The sequences of DNMT3A, DNMT3A3L, KRAB and LSD1 were PCR amplified from pdCas9DNMT3A-EGFP (Addgene #71666), pET28-Dnmt3a3L-sc27 (Addgene #71827), pHR-SFFV-dCas9-BFP-KRAB (Addgene #46911) and pX330a dCas9-LSD1 (Addgene #92362), respectively. .. The digested vector backbone and the PCR product were joined using the Ligation-Free Cloning Kit (Applied Biological Materials Inc.) according to the manufacturer’s protocol.

    Polymerase Chain Reaction:

    Article Title: Designer Receptors for Nucleotide‐Resolution Analysis of Genomic 5‐Methylcytosine by Cellular Imaging
    Article Snippet: PCR fragment and vector pAnI5211 were digested with NdeI and BsrGI enzymes and then ligated with T4 ligase (New England Biolabs, M0202T) using 3:1 insert:vector molar ratio. pJaW876 was cloned by Gibson assembly2. .. For this, vector pcDNA3.1-GoldenGate-VP64 (Addgene, #47389) was linearized by PCR using primers o2079 and o2080 and the insert DNMT3a3L CD was amplified by PCR using pET28-Dnmt3a3L-sc27 (Addgene, #71827) and o2071 and o2072 primers. .. Vector pÁlM1285 was created by amplifying CMV-EBFP2 from plasmid EBFP2-N1 (Addgene #54595) using primers o2733 and o2734.

    Article Title: Enhanced targeted DNA methylation of the CMV and endogenous promoters with dCas9-DNMT3A3L entails distinct subsequent histone modification changes in CHO cells.
    Article Snippet: For generation of plasmids with scFv-linked EDs encoding the catalytic domain (CD) of DNMT3A, DNMT3A3L, KRAB and LSD1, the TET1 plasmid was digested for 1 h at 37 ◦C with FD-NotI and with FD-NheI (both Thermo Fisher Scientific). .. The sequences of DNMT3A, DNMT3A3L, KRAB and LSD1 were PCR amplified from pdCas9DNMT3A-EGFP (Addgene #71666), pET28-Dnmt3a3L-sc27 (Addgene #71827), pHR-SFFV-dCas9-BFP-KRAB (Addgene #46911) and pX330a dCas9-LSD1 (Addgene #92362), respectively. .. The digested vector backbone and the PCR product were joined using the Ligation-Free Cloning Kit (Applied Biological Materials Inc.) according to the manufacturer’s protocol.

    Plasmid Preparation:

    Article Title: Enhanced targeted DNA methylation of the CMV and endogenous promoters with dCas9-DNMT3A3L entails distinct subsequent histone modification changes in CHO cells.
    Article Snippet: .. pSPgRNA was a gift from Charles Gersbach, pCAG-dCas95xPlat2AflD and pCAG-scFvGCN4sfGFPTET1CD were gifts from Izuho Hatada, pdCas9-DNMT3A-EGFP was a gift from Vlatka Zoldoš, pSpCas9 (BB)-2A-GFP (PX458) was a gift from Feng Zhang (Addgene plasmid # 48138), pET28-Dnmt3a3L-sc27 was a gift from Albert Jeltsch (Addgene plasmid # 71827), pHR-SFFV-dCas9-BFP-KRAB was a gift from Stanley Qi & Jonathan Weissman (Addgene plasmid # 46911), pX330a dCas9- LSD1 was a gift from Tatjana Sauka-Spengler (Addgene plasmid # 92362). ..



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